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POPSPentagon Planning Deployment of Troops in Support of Nationwide Vaccination It is worth noting that this involvement of the military is not being decided by the President, but by the Secretary of Defense, which suggests that the Pentagon is, in a key issue of of national interest, overriding the President and Commander in Chief. The US Congress has not been consulted on the issue. This decision to mobilise the Armed Forces in the vaccination campaign is taken in anticipation of a national emergency. Although no national emergency has been called, the presumption is that a national public health emergency will occur, using the WHO Level 6 Pandemic as a pretext and a justification.